Belongs within: Desulfobacterota. Desulfovibrio is a genus of sulphate-reducing bacteria found in anoxic environments. Desulfovibrio |–D. gabonensisAD03 `–+–+–D. salexigensAD03 | `–+–D. hydrothermalis Alazard, Dukan et al. 2003AD03 | `–D. zosterae Nielsen, Liesack & Finster 1999AD03 `–+–D. halophilusAD03 `–+–D. profundus Bale, Goodman et al. 1997AD03 `–+–D. aespoeensisAD03 `–‘D. caledoniensis’AD03Desulfovibrio incertae sedis: D. africanusMK03 D. burkinensisTNH04 D.… Continue reading Desulfovibrio
Category: Gracilicutes
Deltaproteobacteria
Belongs within: Gracilicutes.Contains: Desulfobacterota. The Deltaproteobacteria are an ecologically diverse assemblage of bacteria united by molecular data. They include the Myxococcota, myxobacteria, soil-dwelling bacteria exhibiting gliding motility that aggregate in swarms to produce fruiting bodies. Members of the Myxococcales produce myxospores within the fruiting bodies via substantial shortening and flattening of the cells whereas Polyangia… Continue reading Deltaproteobacteria
Proteobacteria
Belongs within: Gracilicutes.Contains: Chromatibacteria, Rickettsiales, Rhodospirillales, Rhodobacteraceae, Rhizobiales. The Proteobacteria are a diverse clade of bacteria united by molecular data. Alpha bacteria Published 8 October 2015 From about the 1980s onwards, the increasing application of molecular data (particularly the sequences of ribosomal RNA genes) to bacterial phylogeny meant that what had previously been an intractable… Continue reading Proteobacteria
Rhizobiales
Belongs within: Proteobacteria.Contains: Bradyrhizobiaceae, Rhizobiaceae. The Rhizobiales are a clade of Gram-negative bacteria united by molecular data, many of which are nitrogen-fixers forming symbiotic associations with plant roots. <==Rhizobiales | i. s.: RoseibiumCG03 | Rochalimaea quintanaPHK96 |–+–Rhodobium [Rhodobiaceae]CG03 | | |–R. marinum [=Rhodopseudomonas marina]I01 | | | |–R. m. ssp. marinumPHK96 | | | `–‘Rhodopseudomonas’… Continue reading Rhizobiales
Rhodospirillales
Belongs within: Proteobacteria. The Rhodospirillales are a clade of Gram-negative bacteria united by molecular analysis, many of which contain photosynthetic pigments. The Rhodospirillales: it’s photosynthesis, but not as you know it Published 20 August 2012 For today’s post, I’m going to take a look at the Rhodospirillales. This is a clade within the larger bacterial… Continue reading Rhodospirillales
Hyphomicrobiaceae
Belongs within: Chromatibacteria. The Hyphomicrobiaceae are mostly aerobic, chemoheterotrophic bacteria, many of which are prosthecate and multiply by budding. <==Hyphomicrobiaceae |–HyphomicrobiumCG03 | |–H. denitrificansLPV04 | |–H. facilisPHK96 | |–H. sulfonivorans Borodina, Kelly et al. 2002VP IJSEM02 | `–H. vulgarePHK96 `–+–XanthobacterDT03 | |–+–X. autotrophicusDT03 | | `–X. viscosus Doronina & Trotsenko 2003 [=Blastobacter viscosus (nom. inv.)]DT03… Continue reading Hyphomicrobiaceae
Rhizobiaceae
Belongs within: Rhizobiales. The Rhizobiaceae are soil-dwelling aerobic bacteria, many of which live in association with plant roots. Friend and/or foe: separating Rhizobium and Agrobacterium Published 11 November 2014 For as far back as we have records to know, farmers have recognised the value of crop rotation: varying the crops grown on a particular patch… Continue reading Rhizobiaceae
Chromatibacteria
Belongs within: Proteobacteria.Contains: Neisseriaceae, Nitrosomonadales, Hyphomicrobiaceae, Burkholderiales, Xanthomonas, Ectothiorhodospiraceae, Chromatiaceae, Legionella, Methylococcaceae, Oceanospirillales, Thiotrichales, Alteromonadaceae, Aeromonas, Pasteurellaceae, Enterobacterales, Vibrio. The Chromatibacteria are a diverse clade of bacteria united by molecular data, including the ‘beta’ and ‘gamma’ branches of the Proteobacteria (Cavalier-Smith 2002). <==Chromatibacteria | i. s.: Curacaobacter balticaSC03 | PseudomasNL03 | Fulvimonas soliMCS03 | Massilia… Continue reading Chromatibacteria
Bradyrhizobiaceae
Belongs within: Rhizobiales. The Bradyrhizobiaceae are a metabolically diverse assemblage of bacteria united by molecular data. <==Bradyrhizobiaceae | i. s.: AgromonasGH01 | OligotrophaGH01 |–AfipiaCG03 | |–A. broomeaeLSM03 | `–+–A. clevelandensisLSM03 | `–A. felisLSM03 `–+–+–RhodoplanesDT03 | | |–R. elegansI01 | | `–R. roseusDT03 [=Rhodopseudomonas roseaI01] | `–RhodopseudomonasCG03 | |–R. acidophilaI01 | |–R. capsulataAS92 | |–R. cryptolactisI01… Continue reading Bradyrhizobiaceae
Legionella
Belongs within: Chromatibacteria. Legionella is a genus of Gram-negative bacteria that require an external supply of L-cysteine for growth (Park et al. 2003). <==Legionella | i. s.: L. drozanskii Adeleke et al. 2001JC08 | L. fallonii Adeleke et al. 2001JC08 | L. quateirensisPK03 | L. rowbothamii Adeleke et al. 2001JC08 |–L. geestianaPK03 `–+–+–L. spiritensisPK03 |… Continue reading Legionella